PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thhalv10014566m
Common NameEUTSA_v10014566mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
Family ERF
Protein Properties Length: 235aa    MW: 25246.2 Da    PI: 4.9801
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thhalv10014566mgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.31.1e-1466115155
              AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      s ++G+r +  +g+Wv+eIr+p++   ++r++lg++  +e+Aa+a++ a+++l+g
  Thhalv10014566m  66 SFFRGIRLR--NGKWVSEIREPRK---TTRIWLGTYPVPEMAAAAYDVAALALKG 115
                      5699**975..6*********843...5************************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541714.51E-1766123IPR016177DNA-binding domain
PROSITE profilePS5103219.24367123IPR001471AP2/ERF domain
SMARTSM003801.4E-2567129IPR001471AP2/ERF domain
CDDcd000189.90E-1668123No hitNo description
Gene3DG3DSA:3.30.730.101.0E-2468123IPR001471AP2/ERF domain
PfamPF008472.6E-868115IPR001471AP2/ERF domain
PRINTSPR003678.0E-66879IPR001471AP2/ERF domain
PRINTSPR003678.0E-6105125IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    Send to blast
MSNTNSPTTG NQQTTTFRVA SIALPSKPYD QSPQSSPCSS SSPRPSLTSG VSPARRTTTG  60
LSGRHSFFRG IRLRNGKWVS EIREPRKTTR IWLGTYPVPE MAAAAYDVAA LALKGSDAVL  120
NFPGLASTYV APASNSAADI RAAAARAAEM KQPDPGGAER VENSGRPGKK EEEEEEEALL  180
SCSLEFMDEE AMLNMPSLLT EMAEGMLMSP PRMTNPTMDD SPENHEGDSL WSYK*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00558DAPTransfer from AT5G52020Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006401877.11e-172hypothetical protein EUTSA_v10014566mg
SwissprotQ9FJ901e-104ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLV4KZD21e-172V4KZD2_EUTSA; Uncharacterized protein
STRINGscaffold_801641.11e-106(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM134571424
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.12e-86ERF family protein